8IKR
Crystal structure of DpaA
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | NSRRC BEAMLINE BL15A1 |
Synchrotron site | NSRRC |
Beamline | BL15A1 |
Temperature [K] | 80 |
Detector technology | CCD |
Collection date | 2020-07-23 |
Detector | RAYONIX MX300HE |
Wavelength(s) | 1 |
Spacegroup name | P 4 21 2 |
Unit cell lengths | 86.876, 86.876, 150.675 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 28.470 - 2.900 |
R-factor | 0.21747 |
Rwork | 0.215 |
R-free | 0.27370 |
Structure solution method | MOLECULAR REPLACEMENT |
RMSD bond length | 0.010 |
RMSD bond angle | 1.855 |
Data reduction software | XDS |
Data scaling software | XDS |
Phasing software | PHENIX |
Refinement software | REFMAC (5.8.0405) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 28.470 | 3.004 |
High resolution limit [Å] | 2.900 | 2.900 |
Rmerge | 0.202 | |
Rpim | 0.019 | |
Number of reflections | 13361 | 1280 |
<I/σ(I)> | 26.07 | |
Completeness [%] | 99.5 | |
Redundancy | 2 | |
CC(1/2) | 0.999 | 0.982 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 295 | 19-25% (w/v) PEG 3350, 0.1M Bis-Tris-HCl, pH 6-7, 0.2M ammonium acetate |