8IIB
Crystal structure of Israeli acute paralysis virus RNA-dependent RNA polymerase delta85 mutant (residues 86-546)
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SSRF BEAMLINE BL17U1 |
Synchrotron site | SSRF |
Beamline | BL17U1 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2018-12-06 |
Detector | DECTRIS EIGER X 16M |
Wavelength(s) | 0.9792 |
Spacegroup name | P 31 2 1 |
Unit cell lengths | 150.510, 150.510, 104.626 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 23.410 - 2.690 |
R-factor | 0.2147 |
Rwork | 0.213 |
R-free | 0.25390 |
Structure solution method | SAD |
Data reduction software | HKL-2000 |
Data scaling software | HKL-2000 |
Phasing software | PHENIX |
Refinement software | PHENIX (1.17) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 23.800 | 23.800 | 2.800 |
High resolution limit [Å] | 2.690 | 5.790 | 2.690 |
Rmerge | 0.041 | 0.020 | 0.713 |
Rmeas | 0.043 | 0.021 | 0.749 |
Rpim | 0.014 | 0.007 | 0.229 |
Number of reflections | 38083 | 3954 | 3746 |
<I/σ(I)> | 16.2 | ||
Completeness [%] | 100.0 | 99.6 | 100 |
Redundancy | 10.1 | 9.6 | 10.6 |
CC(1/2) | 0.999 | 0.931 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | EVAPORATION | 8.5 | 289 | PEG 4000 |