8IGU
Hexameric Ring Complex of Engineered V1-ATPase: A3(De)3_empty
This is a non-PDB format compatible entry.
Replaces: 7COPExperimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | PHOTON FACTORY BEAMLINE BL-1A |
Synchrotron site | Photon Factory |
Beamline | BL-1A |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2017-04-22 |
Detector | DECTRIS EIGER X 4M |
Wavelength(s) | 1.1 |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 122.449, 122.653, 128.704 |
Unit cell angles | 90.00, 90.74, 90.00 |
Refinement procedure
Resolution | 44.640 - 2.770 |
R-factor | 0.2187 |
Rwork | 0.216 |
R-free | 0.26240 |
Structure solution method | MOLECULAR REPLACEMENT |
RMSD bond length | 0.005 |
RMSD bond angle | 0.978 |
Data reduction software | XDS |
Data scaling software | Aimless |
Phasing software | PHASER |
Refinement software | PHENIX (1.18_3845) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 44.640 | 2.820 |
High resolution limit [Å] | 2.770 | 2.770 |
Rmerge | 0.098 | 0.876 |
Rpim | 0.040 | 0.380 |
Number of reflections | 96837 | 4764 |
<I/σ(I)> | 14.2 | 2.1 |
Completeness [%] | 100.0 | 100 |
Redundancy | 7 | 7.3 |
CC(1/2) | 0.998 | 0.728 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 293 | 0.1 M Tris-HCl (pH 8.5), 24% PEG 3350 and 0.2 M Ammonium Acetate |