8IGU
Hexameric Ring Complex of Engineered V1-ATPase: A3(De)3_empty
This is a non-PDB format compatible entry.
Replaces: 7COPExperimental procedure
| Experimental method | SINGLE WAVELENGTH |
| Source type | SYNCHROTRON |
| Source details | PHOTON FACTORY BEAMLINE BL-1A |
| Synchrotron site | Photon Factory |
| Beamline | BL-1A |
| Temperature [K] | 100 |
| Detector technology | PIXEL |
| Collection date | 2017-04-22 |
| Detector | DECTRIS EIGER X 4M |
| Wavelength(s) | 1.1 |
| Spacegroup name | P 1 21 1 |
| Unit cell lengths | 122.449, 122.653, 128.704 |
| Unit cell angles | 90.00, 90.74, 90.00 |
Refinement procedure
| Resolution | 44.640 - 2.770 |
| R-factor | 0.2187 |
| Rwork | 0.216 |
| R-free | 0.26240 |
| Structure solution method | MOLECULAR REPLACEMENT |
| RMSD bond length | 0.005 |
| RMSD bond angle | 0.978 |
| Data reduction software | XDS |
| Data scaling software | Aimless |
| Phasing software | PHASER |
| Refinement software | PHENIX (1.18_3845) |
Data quality characteristics
| Overall | Outer shell | |
| Low resolution limit [Å] | 44.640 | 2.820 |
| High resolution limit [Å] | 2.770 | 2.770 |
| Rmerge | 0.098 | 0.876 |
| Rpim | 0.040 | 0.380 |
| Number of reflections | 96837 | 4764 |
| <I/σ(I)> | 14.2 | 2.1 |
| Completeness [%] | 100.0 | 100 |
| Redundancy | 7 | 7.3 |
| CC(1/2) | 0.998 | 0.728 |
Crystallization Conditions
| crystal ID | method | pH | temperature | details |
| 1 | VAPOR DIFFUSION, SITTING DROP | 293 | 0.1 M Tris-HCl (pH 8.5), 24% PEG 3350 and 0.2 M Ammonium Acetate |






