8IG4
Crystal structure of SARS-Cov-2 main protease in complex with GC376
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SSRF BEAMLINE BL02U1 |
Synchrotron site | SSRF |
Beamline | BL02U1 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2022-09-29 |
Detector | DECTRIS EIGER2 S 9M |
Wavelength(s) | 0.97918 |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 55.284, 98.621, 59.161 |
Unit cell angles | 90.00, 108.34, 90.00 |
Refinement procedure
Resolution | 48.800 - 1.800 |
R-factor | 0.199178796892 |
Rwork | 0.197 |
R-free | 0.23991 |
Structure solution method | MOLECULAR REPLACEMENT |
RMSD bond length | 0.007 |
RMSD bond angle | 0.904 |
Data reduction software | XDS |
Data scaling software | XDS |
Phasing software | PHENIX |
Refinement software | PHENIX (1.12_2829) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 48.800 | 1.890 |
High resolution limit [Å] | 1.800 | 1.800 |
Rmerge | 0.075 | 0.685 |
Number of reflections | 51000 | 7844 |
<I/σ(I)> | 11.7 | |
Completeness [%] | 91.2 | |
Redundancy | 5.7 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 293 | 0.1M HEPES 7.5, 20% PEG 10000 |