8I6Y
Crystal structure of Arabidopsis thaliana LOX1
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SSRF BEAMLINE BL02U1 |
Synchrotron site | SSRF |
Beamline | BL02U1 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2021-11-25 |
Detector | DECTRIS EIGER2 S 9M |
Wavelength(s) | 0.97914 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 116.368, 119.349, 135.360 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 67.680 - 3.260 |
R-factor | 0.2341 |
Rwork | 0.233 |
R-free | 0.25880 |
Structure solution method | MOLECULAR REPLACEMENT |
RMSD bond length | 0.016 |
RMSD bond angle | 1.793 |
Data reduction software | HKL-3000 (7.21) |
Data scaling software | HKL-3000 (7.21) |
Phasing software | PHENIX (1.17.1_3660) |
Refinement software | PHENIX (1.17.1_3660) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 89.520 | 3.440 |
High resolution limit [Å] | 3.260 | 3.260 |
Rpim | 0.094 | 0.393 |
Number of reflections | 28779 | 4175 |
<I/σ(I)> | 8.3 | 2.3 |
Completeness [%] | 95.8 | 96.8 |
Redundancy | 6.4 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 291 | 25% polyethylene glycol 4000 (PEG 4K), 100 mM sodium cacodylate with pH 5.0 |