8I6K
Structure of hMNDA HIN with dsDNA
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | ROTATING ANODE |
Source details | RIGAKU MICROMAX-007 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2021-04-24 |
Detector | DECTRIS PILATUS 200K |
Wavelength(s) | 1.5418 |
Spacegroup name | P 32 |
Unit cell lengths | 40.652, 40.652, 138.760 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 13.070 - 2.400 |
R-factor | 0.202 |
Rwork | 0.199 |
R-free | 0.25310 |
Structure solution method | MOLECULAR REPLACEMENT |
RMSD bond length | 0.011 |
RMSD bond angle | 1.330 |
Data reduction software | HKL-3000 |
Data scaling software | HKL-3000 |
Phasing software | PHENIX |
Refinement software | PHENIX ((1.15_3459: ???)) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 13.070 | 2.486 |
High resolution limit [Å] | 2.400 | 2.400 |
Rmerge | 0.038 | 0.356 |
Rmeas | 0.042 | 0.422 |
Rpim | 0.019 | 0.223 |
Number of reflections | 9936 | 955 |
<I/σ(I)> | 30.5 | 2.94 |
Completeness [%] | 99.3 | 100 |
Redundancy | 4.8 | 3.4 |
CC(1/2) | 0.999 | 0.864 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 8 | 289 | 0.1 M Sodium malonate pH 8.0, 0.1 M Tris pH 8.0, 30% w/v Polyethylene glycol 1000 |