8I6H
Crystal structure of the African swine fever virus DNA sliding clamp (selenomethionine form)
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SSRF BEAMLINE BL17U |
Synchrotron site | SSRF |
Beamline | BL17U |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2019-12-07 |
Detector | DECTRIS EIGER X 16M |
Wavelength(s) | 0.9792 |
Spacegroup name | H 3 |
Unit cell lengths | 146.637, 146.637, 92.934 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 22.854 - 2.292 |
R-factor | 0.1837 |
Rwork | 0.181 |
R-free | 0.22880 |
Structure solution method | SAD |
RMSD bond length | 0.008 |
RMSD bond angle | 1.078 |
Data reduction software | HKL-2000 |
Data scaling software | HKL-2000 |
Phasing software | AutoSol |
Refinement software | PHENIX (1.9) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 50.000 | 50.000 | 2.370 |
High resolution limit [Å] | 2.290 | 4.930 | 2.290 |
Rmerge | 0.113 | 0.081 | 0.707 |
Rmeas | 0.121 | 0.087 | 0.760 |
Rpim | 0.043 | 0.031 | 0.273 |
Total number of observations | 267233 | ||
Number of reflections | 33401 | 3344 | 3359 |
<I/σ(I)> | 9.9 | ||
Completeness [%] | 99.9 | 100 | 99.5 |
Redundancy | 8 | 7.7 | 6.9 |
CC(1/2) | 0.995 | 0.908 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | EVAPORATION | 8.5 | 289 | Tris-HCl, PEG 3350, Ammonium Acetate |