8I4S
the complex structure of SARS-CoV-2 Mpro with D8
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SSRF BEAMLINE BL18U1 |
Synchrotron site | SSRF |
Beamline | BL18U1 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2022-08-02 |
Detector | DECTRIS EIGER X 16M |
Wavelength(s) | 0.97918 |
Spacegroup name | C 1 2 1 |
Unit cell lengths | 98.364, 81.332, 51.675 |
Unit cell angles | 90.00, 114.74, 90.00 |
Refinement procedure
Resolution | 42.410 - 2.200 |
R-factor | 0.1878 |
Rwork | 0.185 |
R-free | 0.22380 |
Structure solution method | MOLECULAR REPLACEMENT |
RMSD bond length | 0.008 |
RMSD bond angle | 1.022 |
Data reduction software | XDS |
Data scaling software | XDS |
Phasing software | PHENIX |
Refinement software | PHENIX (1.18.2_3874) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 42.410 | 2.279 |
High resolution limit [Å] | 2.200 | 2.200 |
Number of reflections | 35746 | 6681 |
<I/σ(I)> | 6.82 | |
Completeness [%] | 99.7 | |
Redundancy | 3.7 | |
CC(1/2) | 0.986 | 0.890 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 6.5 | 293 | 12% PEG 20,000, 0.1 M MES monohydrate (pH 6.5) |