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8I3J

Crystal structure of human inner-arm dynein heavy chain d stalk and microtubule binding domain

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsSPRING-8 BEAMLINE BL44XU
Synchrotron siteSPring-8
BeamlineBL44XU
Temperature [K]100
Detector technologyPIXEL
Collection date2018-08-05
DetectorDECTRIS EIGER X 16M
Wavelength(s)0.97938
Spacegroup nameP 61 2 2
Unit cell lengths147.468, 147.468, 85.075
Unit cell angles90.00, 90.00, 120.00
Refinement procedure
Resolution42.570 - 2.690
R-factor0.2582
Rwork0.258
R-free0.26790
Structure solution methodSAD
RMSD bond length0.010
RMSD bond angle1.422
Data reduction softwareXDS
Data scaling softwareXDS
Phasing softwareSHELXCD
Refinement softwarePHENIX (1.19.2-4158)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]50.0002.850
High resolution limit [Å]2.6902.690
Rmerge0.123
Rmeas0.1252.062
Rpim0.020
Number of reflections288114588
<I/σ(I)>24.832.12
Completeness [%]98.798.3
Redundancy20.919.4
CC(1/2)1.0000.975
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP277Potassium sodium tartrate tetrahydrate, PEG 3350

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PDB entries from 2024-07-10

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