8I30
Crystal structure of the SARS-CoV-2 main protease in complex with 32j
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SSRF BEAMLINE BL18U1 |
Synchrotron site | SSRF |
Beamline | BL18U1 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2022-08-15 |
Detector | DECTRIS PILATUS 6M |
Wavelength(s) | 0.97852 |
Spacegroup name | C 1 2 1 |
Unit cell lengths | 97.249, 84.697, 51.479 |
Unit cell angles | 90.00, 115.14, 90.00 |
Refinement procedure
Resolution | 43.780 - 2.000 |
R-factor | 0.1887 |
Rwork | 0.187 |
R-free | 0.22620 |
Structure solution method | MOLECULAR REPLACEMENT |
RMSD bond length | 0.008 |
RMSD bond angle | 1.010 |
Data reduction software | XDS |
Data scaling software | Aimless |
Phasing software | MOLREP |
Refinement software | PHENIX (1.18.2-3874) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 46.600 | 2.050 |
High resolution limit [Å] | 2.000 | 2.000 |
Rmerge | 0.042 | 0.372 |
Rmeas | 0.051 | 0.443 |
Rpim | 0.028 | 0.238 |
Number of reflections | 24899 | 1869 |
<I/σ(I)> | 13.7 | 2.3 |
Completeness [%] | 97.5 | 99.4 |
Redundancy | 3.2 | 3.3 |
CC(1/2) | 0.998 | 0.954 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 4.5 | 291 | 0.1 M sodium acetate trihydrate pH 4.5, 25% w/v PEG 3350 |