8I0X
Beta-Xylosidase JB13GH39P28 showing salt/ethanol/trypsin tolerance, low-pH/low-Temperature activity, and transformation of notoginsenosides
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SSRF BEAMLINE BL10U2 |
Synchrotron site | SSRF |
Beamline | BL10U2 |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2022-09-17 |
Detector | MARMOSAIC 225 mm CCD |
Wavelength(s) | 0.9791 |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 64.403, 62.627, 140.117 |
Unit cell angles | 90.00, 91.42, 90.00 |
Refinement procedure
Resolution | 32.640 - 2.000 |
R-factor | 0.1707 |
Rwork | 0.169 |
R-free | 0.20960 |
Structure solution method | MOLECULAR REPLACEMENT |
RMSD bond length | 0.004 |
RMSD bond angle | 0.759 |
Data reduction software | DIALS (3.7.2) |
Data scaling software | DIALS (3.7.2) |
Phasing software | PHENIX (1.15.1_3469) |
Refinement software | PHENIX (1.15.1_3469) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 32.640 | 2.071 |
High resolution limit [Å] | 1.999 | 1.999 |
Rmeas | 0.353 | |
Rpim | 0.139 | |
Number of reflections | 75588 | 7109 |
<I/σ(I)> | 6.37 | 2.06 |
Completeness [%] | 97.9 | 94.51 |
Redundancy | 6.5 | 6.6 |
CC(1/2) | 0.980 | 0.515 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 8.5 | 291.15 | 16% PEG 3350,100 mM BIS-TRIS propane pH 8.5, 20.00 mM Sodium Potassium phosphate |