8HY1
Crystal structure of B1 VIM-2 MBL in complex with 2-amino-5-(thiophen-2-ylmethyl)thiazole-4-carboxylic acid
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SSRF BEAMLINE BL19U1 |
Synchrotron site | SSRF |
Beamline | BL19U1 |
Temperature [K] | 195 |
Detector technology | PIXEL |
Collection date | 2020-04-17 |
Detector | DECTRIS PILATUS3 X CdTe 1M |
Wavelength(s) | 1 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 45.561, 89.724, 126.565 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 27.040 - 1.937 |
R-factor | 0.1883 |
Rwork | 0.186 |
R-free | 0.22430 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 7dv0 |
RMSD bond length | 0.015 |
RMSD bond angle | 1.057 |
Data reduction software | HKL-3000 |
Data scaling software | HKL-3000 |
Phasing software | PHASER |
Refinement software | PHENIX (1.10.1_2155) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 50.000 | 50.000 | 1.980 |
High resolution limit [Å] | 1.937 | 5.290 | 1.950 |
Rmerge | 0.131 | 0.109 | 0.304 |
Number of reflections | 38780 | 2161 | 1800 |
<I/σ(I)> | 7.4 | ||
Completeness [%] | 98.6 | 99.7 | 92 |
Redundancy | 13.4 | 12.1 | 12.5 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 293 | 0.2M Magnesium Formate, 28%-35% (v/v) Polyethylene glycol 3350 |