8HTY
Candida boidinii Formate Dehydrogenase Crystal Structure at 1.4 Angstrom Resolution
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | ROTATING ANODE |
Source details | RIGAKU PhotonJet-R |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2022-03-31 |
Detector | RIGAKU HyPix-3000 |
Wavelength(s) | 1.54 |
Spacegroup name | P 1 |
Unit cell lengths | 54.132, 68.959, 109.792 |
Unit cell angles | 78.14, 89.48, 81.11 |
Refinement procedure
Resolution | 21.830 - 1.400 |
R-factor | 0.1675 |
Rwork | 0.167 |
R-free | 0.19040 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 5dna |
RMSD bond length | 0.015 |
RMSD bond angle | 1.422 |
Data reduction software | CrysalisPro (1.171.42.35a) |
Data scaling software | CrysalisPro (1.171.42.35a) |
Phasing software | PHASER (2.8.3) |
Refinement software | PHENIX (1.20.1) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 24.750 | 1.510 |
High resolution limit [Å] | 1.390 | 1.390 |
Number of reflections | 301717 | 18691 |
<I/σ(I)> | 11.74 | |
Completeness [%] | 98.8 | 86 |
Redundancy | 151.46 | |
CC(1/2) | 0.999 | 0.340 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 6.5 | 277 | 30% (w/v) PEG 5000 MME, 100 mM MES/Sodium hydroxide pH 6.5, 200 mM Ammonium sulfate |