8HQL
Crystal structure of mouse SNX25 PX domain
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SSRF BEAMLINE BL19U1 |
Synchrotron site | SSRF |
Beamline | BL19U1 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2017-06-01 |
Detector | DECTRIS PILATUS3 6M |
Wavelength(s) | 0.978 |
Spacegroup name | P 61 2 2 |
Unit cell lengths | 92.680, 92.680, 449.521 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 39.000 - 2.400 |
R-factor | 0.20074 |
Rwork | 0.199 |
R-free | 0.24186 |
Structure solution method | MOLECULAR REPLACEMENT |
RMSD bond length | 0.014 |
RMSD bond angle | 1.877 |
Data reduction software | iMOSFLM |
Data scaling software | Aimless |
Phasing software | MOLREP |
Refinement software | REFMAC (5.8.0267) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 39.970 | 2.480 |
High resolution limit [Å] | 2.400 | 2.400 |
Rmerge | 0.078 | 0.780 |
Rmeas | 0.084 | 0.832 |
Rpim | 0.029 | 0.285 |
Total number of observations | 360104 | 35765 |
Number of reflections | 46187 | 4398 |
<I/σ(I)> | 16.6 | 2.8 |
Completeness [%] | 99.9 | |
Redundancy | 7.8 | 8.1 |
CC(1/2) | 0.995 | 0.804 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 293 | 1.8 M Magnesium sulfate hydrate, 0.1 M Sodium acetate trihydrate pH 4.8 |