8HMS
Crystal Structure of PKM2 mutant C474S
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | RRCAT INDUS-2 BEAMLINE PX-BL21 |
Synchrotron site | RRCAT INDUS-2 |
Beamline | PX-BL21 |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2022-02-10 |
Detector | MARMOSAIC 225 mm CCD |
Wavelength(s) | 0.9778 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 98.733, 134.584, 148.528 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 46.850 - 2.100 |
R-factor | 0.2054 |
Rwork | 0.204 |
R-free | 0.23820 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 3gr4 |
RMSD bond length | 0.004 |
RMSD bond angle | 0.659 |
Data reduction software | XDS |
Data scaling software | Aimless |
Phasing software | PHASER |
Refinement software | PHENIX (1.20.1_4487) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 46.850 | 2.140 |
High resolution limit [Å] | 2.100 | 2.100 |
Number of reflections | 115815 | 5659 |
<I/σ(I)> | 18 | |
Completeness [%] | 100.0 | |
Redundancy | 7.3 | |
CC(1/2) | 0.999 | 0.800 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 8.5 | 291 | 0.2 M Sodium citrate tribasic dihydrate 0.1 M Bis-Tris propane pH8.5, 20% w/v PEG 3350 |