8HK9
Apo-form of Periplasmic terephthalate binding protein (TBP) from Ideonella sakaiensis
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | PAL/PLS BEAMLINE 7A (6B, 6C1) |
Synchrotron site | PAL/PLS |
Beamline | 7A (6B, 6C1) |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2020-11-13 |
Detector | ADSC QUANTUM 270 |
Wavelength(s) | 0.97934 |
Spacegroup name | I 4 |
Unit cell lengths | 131.883, 131.883, 75.577 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 32.990 - 2.000 |
R-factor | 0.18399 |
Rwork | 0.181 |
R-free | 0.23749 |
Structure solution method | MOLECULAR REPLACEMENT |
RMSD bond length | 0.007 |
RMSD bond angle | 1.412 |
Data reduction software | HKL-2000 |
Data scaling software | HKL-2000 |
Phasing software | MOLREP |
Refinement software | REFMAC (8.0) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 50.000 | 50.000 | 2.030 |
High resolution limit [Å] | 2.000 | 5.430 | 2.000 |
Rmerge | 0.062 | 0.040 | 0.259 |
Number of reflections | 43351 | 4027 | 3635 |
<I/σ(I)> | 14.5 | ||
Completeness [%] | 90.4 | 93.2 | 83.8 |
Redundancy | 1.8 | 1.8 | 1.6 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 293.15 | 20 % PEG3350 and 0.2 M Magnesium nitrate hexahydrate |