8HGI
Crystal structure of VNAR aGFP14 in complex with GFP
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SSRF BEAMLINE BL10U2 |
Synchrotron site | SSRF |
Beamline | BL10U2 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2022-08-26 |
Detector | DECTRIS EIGER X 9M |
Wavelength(s) | 0.97902 |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 59.449, 102.797, 66.620 |
Unit cell angles | 90.00, 116.33, 90.00 |
Refinement procedure
Resolution | 59.710 - 1.950 |
R-factor | 0.18878 |
Rwork | 0.186 |
R-free | 0.24158 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 4ppk 7fbj |
RMSD bond length | 0.008 |
RMSD bond angle | 1.514 |
Data reduction software | DIALS (0.7.7) |
Data scaling software | SCALEPACK (0.5.28) |
Phasing software | PHASER (2.8.3) |
Refinement software | REFMAC (5.8.0267) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 102.800 | 2.000 |
High resolution limit [Å] | 1.950 | 1.950 |
Rmerge | 0.072 | 0.523 |
Rmeas | 0.087 | 0.680 |
Rpim | 0.048 | 0.428 |
Number of reflections | 51988 | 3563 |
<I/σ(I)> | 10.3 | 2.5 |
Completeness [%] | 99.4 | 92.7 |
Redundancy | 5.8 | 3.8 |
CC(1/2) | 0.998 | 0.737 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 6.8 | 291 | 18%(w/v) PEG8000 0.1M Na/K PO4 pH6.8 |