8HDJ
Periplasmic domain of RsgI2 of Clostridium thermocellum
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SSRF BEAMLINE BL02U1 |
Synchrotron site | SSRF |
Beamline | BL02U1 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2021-10-17 |
Detector | DECTRIS EIGER2 S 9M |
Wavelength(s) | 0.979 |
Spacegroup name | C 1 2 1 |
Unit cell lengths | 75.090, 101.530, 86.360 |
Unit cell angles | 90.00, 92.93, 90.00 |
Refinement procedure
Resolution | 24.350 - 1.850 |
R-factor | 0.2222 |
Rwork | 0.219 |
R-free | 0.23780 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | AFDB:A3DC27F1 |
Data reduction software | MOSFLM |
Data scaling software | Aimless (0.7.4) |
Phasing software | PHENIX |
Refinement software | PHENIX (1.13_2998) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 24.840 | 24.840 | 1.890 |
High resolution limit [Å] | 1.850 | 9.060 | 1.850 |
Rmerge | 0.074 | 0.099 | 0.266 |
Rmeas | 0.089 | 0.120 | 0.333 |
Rpim | 0.049 | 0.067 | 0.197 |
Total number of observations | 169195 | 1074 | 9078 |
Number of reflections | 54750 | 373 | 3371 |
<I/σ(I)> | 9.3 | 13.9 | 3.4 |
Completeness [%] | 99.4 | 76.1 | 99.6 |
Redundancy | 3.1 | 2.9 | 2.7 |
CC(1/2) | 0.993 | 0.963 | 0.836 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 291 | 0.2 M Lithium sulfate monohydrate, pH 6.0, 20% w/v Polyethylene glycol 3350 |