8HDD
Complex structure of catalytic, small, and a partial electron transfer subunits from Burkholderia cepacia FAD glucose dehydrogenase
Experimental procedure
| Experimental method | SINGLE WAVELENGTH |
| Source type | SYNCHROTRON |
| Source details | SPRING-8 BEAMLINE BL41XU |
| Synchrotron site | SPring-8 |
| Beamline | BL41XU |
| Temperature [K] | 100 |
| Detector technology | PIXEL |
| Collection date | 2016-12-08 |
| Detector | DECTRIS PILATUS3 6M |
| Wavelength(s) | 1.0 |
| Spacegroup name | P 21 21 2 |
| Unit cell lengths | 204.015, 71.797, 114.221 |
| Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
| Resolution | 49.880 - 3.000 |
| R-factor | 0.27778 |
| Rwork | 0.275 |
| R-free | 0.32335 |
| Structure solution method | MOLECULAR REPLACEMENT |
| Starting model (for MR) | 6a2u |
| RMSD bond length | 0.002 |
| RMSD bond angle | 1.135 |
| Data reduction software | XDS |
| Data scaling software | XSCALE |
| Phasing software | MOLREP |
| Refinement software | REFMAC (5.8.0258) |
Data quality characteristics
| Overall | Inner shell | Outer shell | |
| Low resolution limit [Å] | 50.000 | 50.000 | 3.080 |
| High resolution limit [Å] | 3.000 | 13.420 | 3.000 |
| Rmerge | 0.165 | 0.030 | 0.732 |
| Rmeas | 0.179 | 0.033 | 0.791 |
| Number of reflections | 34334 | 447 | 2443 |
| <I/σ(I)> | 10.34 | ||
| Completeness [%] | 99.8 | ||
| Redundancy | 6.7 | ||
| CC(1/2) | 0.998 | 1.000 | 0.961 |
Crystallization Conditions
| crystal ID | method | pH | temperature | details |
| 1 | COUNTER-DIFFUSION | 5.6 | 293 | tacsimate, PEG 3350, DDM, sodium citrate |






