8HBC
Crystal structure of the CysR-CTLD3 fragment of human DEC205
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SSRF BEAMLINE BL18U1 |
Synchrotron site | SSRF |
Beamline | BL18U1 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2016-12-20 |
Detector | DECTRIS PILATUS 6M |
Wavelength(s) | 1.0 |
Spacegroup name | P 1 |
Unit cell lengths | 70.963, 75.874, 89.595 |
Unit cell angles | 64.84, 70.07, 84.18 |
Refinement procedure
Resolution | 29.874 - 3.350 |
R-factor | 0.2068 |
Rwork | 0.202 |
R-free | 0.25380 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | PDB:5XTW CTLD1-2 of CD206 |
RMSD bond length | 0.003 |
RMSD bond angle | 0.741 |
Data reduction software | HKL-3000 |
Data scaling software | HKL-3000 |
Phasing software | PHENIX |
Refinement software | PHENIX (1.11.1_2575) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 29.880 | 3.470 |
High resolution limit [Å] | 3.350 | 3.350 |
Rpim | 0.067 | 0.159 |
Number of reflections | 22317 | 2176 |
<I/σ(I)> | 12.6 | |
Completeness [%] | 97.9 | |
Redundancy | 3.3 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | EVAPORATION | 293 | 0.2 M Sodium Citrate, 20% PEG3350, final pH 7.4 |