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8H9W

Crystal structure of voltage-gated sodium channel NavAb N49K mutant in calcium ion condition

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsSPRING-8 BEAMLINE BL41XU
Synchrotron siteSPring-8
BeamlineBL41XU
Temperature [K]100
Detector technologyPIXEL
Collection date2018-01-20
DetectorDECTRIS PILATUS 6M
Wavelength(s)1
Spacegroup nameI 4 2 2
Unit cell lengths128.030, 128.030, 202.100
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution29.810 - 2.700
R-factor0.2505
Rwork0.250
R-free0.26380
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)5yuc
RMSD bond length0.009
RMSD bond angle1.154
Data reduction softwareXDS
Data scaling softwareXSCALE
Phasing softwarePHASER
Refinement softwareREFMAC (1.18.2_3874)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]29.8102.800
High resolution limit [Å]2.7002.700
Number of reflections234251270
<I/σ(I)>24.01
Completeness [%]94.8
Redundancy26.2
CC(1/2)0.9990.883
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP2939%-11% PEG MME 2000, 100 mM sodium chloride, 100 mM magnesium nitrate, 25 mM cadmium nitrate, 100 mM Tris-HCl, pH 8.4

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