8H79
The crystal structure of cyanorhodopsin-II (CyR-II) P7104R from Nodosilinea nodulosa PCC 7104
Experimental procedure
| Experimental method | SINGLE WAVELENGTH |
| Source type | SYNCHROTRON |
| Source details | SPRING-8 BEAMLINE BL32XU |
| Synchrotron site | SPring-8 |
| Beamline | BL32XU |
| Temperature [K] | 93 |
| Detector technology | PIXEL |
| Collection date | 2020-07-02 |
| Detector | DECTRIS EIGER X 9M |
| Wavelength(s) | 1 |
| Spacegroup name | P 3 2 1 |
| Unit cell lengths | 63.150, 63.150, 117.760 |
| Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
| Resolution | 49.600 - 2.070 |
| R-factor | 0.2072 |
| Rwork | 0.203 |
| R-free | 0.24770 |
| Structure solution method | MOLECULAR REPLACEMENT |
| Starting model (for MR) | 1c3w |
| Data reduction software | XDS |
| Data scaling software | XSCALE |
| Phasing software | PHASER |
| Refinement software | PHENIX (1.20.1_4487) |
Data quality characteristics
| Overall | Inner shell | Outer shell | |
| Low resolution limit [Å] | 49.600 | 49.600 | 2.200 |
| High resolution limit [Å] | 2.070 | 6.210 | 2.070 |
| Rmerge | 0.227 | 0.050 | 1.645 |
| Rmeas | 0.236 | 0.053 | 1.716 |
| Total number of observations | 213269 | ||
| Number of reflections | 17190 | 720 | 2824 |
| <I/σ(I)> | 10.25 | 31.97 | 1.8 |
| Completeness [%] | 99.8 | 99.2 | 100 |
| Redundancy | 12.407 | 12.032 | 12.394 |
| CC(1/2) | 0.997 | 0.997 | 0.623 |
Crystallization Conditions
| crystal ID | method | pH | temperature | details |
| 1 | LIPIDIC CUBIC PHASE | 6.8 | 293 | 100mM HEPES, 46% PEG 400, 400mM lithium sulfate |






