8H5E
Crystal structure of the MgtE TM domain in complex with Ca2+ ions at 2.5 angstrom resolution
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SPRING-8 BEAMLINE BL32XU |
Synchrotron site | SPring-8 |
Beamline | BL32XU |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2021-05-17 |
Detector | DECTRIS EIGER X 9M |
Wavelength(s) | 1 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 64.760, 70.280, 103.970 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 40.540 - 2.500 |
R-factor | 0.2353 |
Rwork | 0.233 |
R-free | 0.25950 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 4u9l |
RMSD bond length | 0.005 |
RMSD bond angle | 1.194 |
Data reduction software | XDS |
Data scaling software | XDS |
Phasing software | PHASER |
Refinement software | PHENIX ((1.18.2_3874: ???)) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 40.540 | 2.650 |
High resolution limit [Å] | 2.500 | 2.500 |
Number of reflections | 17028 | 2665 |
<I/σ(I)> | 10.8 | |
Completeness [%] | 99.9 | |
Redundancy | 35.3 | |
CC(1/2) | 0.995 | 0.574 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | LIPIDIC CUBIC PHASE | 293 | PEG 400, HEPES, NaSCN |