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8H3K

Crystal Structure of SARS-CoV-2 Main Protease (Mpro) Double Mutant (L50F and E166V) in Complex with Inhibitor Enstrelvir

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsSSRF BEAMLINE BL02U1
Synchrotron siteSSRF
BeamlineBL02U1
Temperature [K]100
Detector technologyPIXEL
Collection date2022-08-17
DetectorDECTRIS EIGER2 S 9M
Wavelength(s)0.978642
Spacegroup nameP 1 21 1
Unit cell lengths55.543, 98.875, 58.991
Unit cell angles90.00, 108.00, 90.00
Refinement procedure
Resolution52.830 - 1.800
R-factor0.1693
Rwork0.168
R-free0.20130
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)7vu6
Data scaling softwareXDS (2020-12-02)
Phasing softwarePHENIX (1.20.1_4487)
Refinement softwarePHENIX (1.20.1_4487)
Data quality characteristics
 OverallInner shellOuter shell
Low resolution limit [Å]52.83052.8301.910
High resolution limit [Å]1.8005.3801.800
Rmerge0.0790.0340.788
Rmeas0.0850.0370.854
Total number of observations377786
Number of reflections5465521348666
<I/σ(I)>15.2946.922.35
Completeness [%]97.498.295.8
Redundancy6.9127.1096.451
CC(1/2)0.9990.9990.833
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP293.150.3% w/v Sodium-L ascorbate, 0.3% w/v Choline Chloride, 0.3% v/v D-Panthenol, 0.3% w/v Pyridoxine hydrochloride, 0.3% w/v Thiamine hydrochloride 20% v/v PEG 500* MME; 10% w/v PEG 20000; 0.1 M 0.1 M Buffer System 2 pH 7.5 (sodium HEPES, MOPS acid)

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PDB entries from 2024-05-15

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