8GRZ
X-ray crystal structure of V71C human neuroglobin mutant
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SSRF BEAMLINE BL10U2 |
Synchrotron site | SSRF |
Beamline | BL10U2 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2022-09-01 |
Detector | DECTRIS PILATUS 2M |
Wavelength(s) | 0.9792 |
Spacegroup name | C 1 2 1 |
Unit cell lengths | 89.497, 39.553, 48.858 |
Unit cell angles | 90.00, 120.32, 90.00 |
Refinement procedure
Resolution | 35.210 - 2.000 |
R-factor | 0.2166 |
Rwork | 0.215 |
R-free | 0.23420 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 4mpm |
RMSD bond length | 0.015 |
RMSD bond angle | 1.549 |
Data reduction software | XDS |
Data scaling software | XDS |
Phasing software | PHASER |
Refinement software | PHENIX (1.18.1_3865) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 50.000 | 2.070 |
High resolution limit [Å] | 2.000 | 2.000 |
Rmerge | 0.048 | 0.357 |
Rpim | 0.028 | 0.235 |
Number of reflections | 9781 | 863 |
<I/σ(I)> | 15.7 | 3.38 |
Completeness [%] | 96.1 | 85.33 |
Redundancy | 3.8 | 3.2 |
CC(1/2) | 0.998 | 0.886 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 293 | PEG 3350 |