8GQC
Crystal structure of the SARS-unique domain (SUD) of SARS-CoV-2 (1.35 angstrom resolution)
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SLS BEAMLINE X06DA |
Synchrotron site | SLS |
Beamline | X06DA |
Temperature [K] | 274 |
Detector technology | PIXEL |
Collection date | 2022-07-19 |
Detector | DECTRIS PILATUS 2M-F |
Wavelength(s) | 0.99995 |
Spacegroup name | P 31 2 1 |
Unit cell lengths | 87.012, 87.012, 76.774 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 37.850 - 1.350 |
R-factor | 0.1406 |
Rwork | 0.140 |
R-free | 0.16230 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 2w2g |
Data reduction software | XDS |
Data scaling software | STARANISO |
Phasing software | PHASER |
Refinement software | PHENIX (1.20_4459) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 37.850 | 1.485 |
High resolution limit [Å] | 1.350 | 1.351 |
Rmerge | 0.042 | 1.733 |
Rpim | 0.010 | 0.403 |
Number of reflections | 55560 | 53798 |
<I/σ(I)> | 1.2 | 1.7 |
Completeness [%] | 96.0 | 72.1 |
Redundancy | 20 | 19.4 |
CC(1/2) | 1.000 | 0.693 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 277 | 0.20 M Lithium sulfate monohydrate, 0.10 M Tris pH= 8.50, 25% PEG3350 |