8GMZ
Structure of methyltransferase
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SSRF BEAMLINE BL19U1 |
Synchrotron site | SSRF |
Beamline | BL19U1 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2021-10-06 |
Detector | DECTRIS PILATUS3 6M |
Wavelength(s) | 0.979 |
Spacegroup name | P 65 |
Unit cell lengths | 97.969, 97.969, 41.546 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 42.420 - 1.880 |
R-factor | 0.2126 |
Rwork | 0.211 |
R-free | 0.24410 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | alphafold2 |
RMSD bond length | 0.014 |
RMSD bond angle | 1.375 |
Data reduction software | autoPROC |
Data scaling software | autoPROC |
Phasing software | PHENIX |
Refinement software | PHENIX (1.20_4459) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 84.840 | 1.980 |
High resolution limit [Å] | 1.880 | 1.880 |
Number of reflections | 18348 | 2709 |
<I/σ(I)> | 22.4 | |
Completeness [%] | 97.8 | |
Redundancy | 15.7 | |
CC(1/2) | 1.000 | 0.840 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION | 5 | 291.15 | Sodium citrate tribasic dihydrate pH 5.0, Jeffamine ED-2001 |