Loading
PDBj
MenuPDBj@FacebookPDBj@X(formerly Twitter)PDBj@BlueSkyPDBj@YouTubewwPDB FoundationwwPDBDonate
RCSB PDBPDBeBMRBAdv. SearchSearch help

8GM8

Crystal structure of shark nonclassical MHC CLASS I, UFA

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsAPS BEAMLINE 24-ID-C
Synchrotron siteAPS
Beamline24-ID-C
Temperature [K]100
Detector technologyPIXEL
Collection date2021-09-26
DetectorDECTRIS EIGER2 X 16M
Wavelength(s)0.97918
Spacegroup nameP 1
Unit cell lengths59.065, 89.865, 90.080
Unit cell angles63.57, 78.25, 80.35
Refinement procedure
Resolution79.800 - 2.830
R-factor0.2306
Rwork0.229
R-free0.27400
Structure solution methodMOLECULAR REPLACEMENT
RMSD bond length0.013
RMSD bond angle1.546
Data reduction softwareMOSFLM
Data scaling softwareAimless
Phasing softwarePHASER
Refinement softwarePHENIX (1.20.1-4487)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]79.8002.960
High resolution limit [Å]2.8302.830
Rmerge0.0551.036
Number of reflections362004278
<I/σ(I)>120.9
Completeness [%]94.090.9
Redundancy3.73.7
CC(1/2)0.9990.674
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP29316% w/v PEG 4000, 0.1 M Tris pH 8.5, and 0.2 M lithium sulfate

258735

PDB entries from 2026-08-26

PDB statisticsPDBj update infoContact PDBjnumon