8GBW
Crystal structure of PC39-23D, an anti-HIV broadly neutralizing antibody
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SSRL BEAMLINE BL12-2 |
Synchrotron site | SSRL |
Beamline | BL12-2 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2015-06-14 |
Detector | DECTRIS PILATUS 6M |
Wavelength(s) | 0.97950 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 48.284, 83.367, 151.767 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 36.530 - 1.500 |
R-factor | 0.1826 |
Rwork | 0.182 |
R-free | 0.20140 |
Structure solution method | MOLECULAR REPLACEMENT |
RMSD bond length | 0.013 |
RMSD bond angle | 1.330 |
Data reduction software | HKL-2000 |
Data scaling software | SCALEPACK |
Phasing software | PHASER (2.5.6) |
Refinement software | PHENIX (1.19.2_4158) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 50.000 | 1.530 |
High resolution limit [Å] | 1.500 | 1.500 |
Rpim | 0.030 | 0.390 |
Number of reflections | 98412 | 4847 |
<I/σ(I)> | 22.7 | 2.1 |
Completeness [%] | 99.6 | 99.4 |
Redundancy | 12.7 | 9.4 |
CC(1/2) | 0.960 | 0.810 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 7.5 | 293.15 | 0.1 M HEPES, 10% PEG 8000 |