8G7H
Crystal Structure of FosB from Bacillus cereus with Zinc and (1-hydroxypropan-2-yl)phosphonic acid
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 22-ID |
Synchrotron site | APS |
Beamline | 22-ID |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2022-09-26 |
Detector | DECTRIS EIGER X 16M |
Wavelength(s) | 1.0 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 64.233, 68.210, 69.826 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 48.793 - 1.810 |
Rwork | 0.154 |
R-free | 0.18520 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 4jh6 |
RMSD bond length | 0.008 |
RMSD bond angle | 1.520 |
Data reduction software | HKL-2000 |
Data scaling software | SCALEPACK (8.0.007) |
Phasing software | PHASER (8.0.004) |
Refinement software | REFMAC (5.8.0405) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 50.000 | 50.000 | 1.840 |
High resolution limit [Å] | 1.810 | 4.910 | 1.810 |
Rmerge | 0.138 | 0.048 | 0.785 |
Rmeas | 0.145 | 0.051 | 0.829 |
Rpim | 0.044 | 0.016 | 0.263 |
Total number of observations | 306631 | ||
Number of reflections | 28683 | 1576 | 1409 |
<I/σ(I)> | 4.1 | ||
Completeness [%] | 99.9 | 99.9 | 100 |
Redundancy | 10.7 | 9.9 | 9.5 |
CC(1/2) | 0.994 | 0.999 | 0.841 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 298 | Protein solution (10 mg/mL FosB in 20 mM HEPES buffer, pH 7.5 and 5 mM inhibitor) and reservoir solution (75 mM Mg formate and 14% (w/v) PEG 3350) were mixed in a Hampton Research VDX plate using a 2:3 ratio of protein:reservoir solutions. Cryoprotected in its reservoir solution with 20% glycerol added prior to rapid freezing in liquid nitrogen |