Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

8G2S

Horse liver alcohol dehydrogense His-51-Gln form complexed with NAD+ and capric acid

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeROTATING ANODE
Source detailsRIGAKU
Temperature [K]100
Detector technologyIMAGE PLATE
Collection date2004-05-18
DetectorRIGAKU RAXIS IV
Wavelength(s)1.5418
Spacegroup nameP 1
Unit cell lengths44.240, 51.250, 92.460
Unit cell angles92.01, 102.87, 109.91
Refinement procedure
Resolution19.980 - 1.450
R-factor0.15689
Rwork0.156
R-free0.18912
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)1n8k
RMSD bond length0.013
RMSD bond angle1.989
Data reduction softwared*TREK
Data scaling softwared*TREK (9.9.9.8L)
Phasing softwareREFMAC
Refinement softwareREFMAC (5.8.0267)
Data quality characteristics
 OverallInner shellOuter shell
Low resolution limit [Å]19.98019.9801.500
High resolution limit [Å]1.4503.1201.450
Rmerge0.0330.0240.210
Rmeas0.0390.0290.248
Total number of observations4371904916024944
Number of reflections114498127846811
<I/σ(I)>23.866.94.3
Completeness [%]87.4
Redundancy3.793.743.55
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1BATCH MODE727810 mg/ml protein in 50 mM ammonium N-[tris(hydroxymethyl)methyl]-2-aminoethanesulfate buffer with 0.25 mM EDTA, 2 mM NAD+ and 1 mM sodium caprate, 13 % 2-methyl-2,4-pentanediol, raised to 25% MPD, then crystals soaked with 1 mM acetaldehyde at 278 K for 70 min and then with 100 mM sodium caprate for 2 h before pliunging into liquid N2.

222926

PDB entries from 2024-07-24

PDB statisticsPDBj update infoContact PDBjnumon