8G0W
Crystal structure of human norovirus GII.4 P domain in complex with Nanobody M4
Experimental procedure
| Experimental method | SINGLE WAVELENGTH |
| Source type | SYNCHROTRON |
| Source details | ALS BEAMLINE 8.2.2 |
| Synchrotron site | ALS |
| Beamline | 8.2.2 |
| Temperature [K] | 100 |
| Detector technology | CCD |
| Collection date | 2017-08-02 |
| Detector | ADSC QUANTUM 315r |
| Wavelength(s) | 1.000000 |
| Spacegroup name | P 1 21 1 |
| Unit cell lengths | 103.511, 90.675, 107.212 |
| Unit cell angles | 90.00, 113.26, 90.00 |
Refinement procedure
| Resolution | 48.820 - 2.870 |
| R-factor | 0.2526 |
| Rwork | 0.251 |
| R-free | 0.29400 |
| Structure solution method | MOLECULAR REPLACEMENT |
| Starting model (for MR) | 7jie |
| RMSD bond length | 0.002 |
| RMSD bond angle | 0.550 |
| Data reduction software | DIALS |
| Data scaling software | Aimless |
| Phasing software | PHASER |
| Refinement software | PHENIX (1.20.1_4487) |
Data quality characteristics
| Overall | Outer shell | |
| Low resolution limit [Å] | 48.820 | 2.990 |
| High resolution limit [Å] | 2.870 | 2.870 |
| Rmerge | 0.154 | 0.468 |
| Rpim | 0.106 | 0.330 |
| Number of reflections | 41417 | 4625 |
| <I/σ(I)> | 5.3 | 2 |
| Completeness [%] | 99.0 | 98.5 |
| Redundancy | 3.7 | |
| CC(1/2) | 0.980 | 0.875 |
Crystallization Conditions
| crystal ID | method | pH | temperature | details |
| 1 | VAPOR DIFFUSION, HANGING DROP | 295 | 2% v/v Tacsimate TM pH 4.0, 0.1 M Sodium acetate trihydrate pH 4.6, 16% w/v Polyethylene glycol 3,350 |






