8G0R
Crystal Structure of Acetyl-CoA synthetase in complex with a cyclopentyl ester AMP inhibitor from Cryptococcus neoformans H99
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | NSLS-II BEAMLINE 19-ID |
Synchrotron site | NSLS-II |
Beamline | 19-ID |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2022-10-30 |
Detector | DECTRIS EIGER2 XE 9M |
Wavelength(s) | 0.97949 |
Spacegroup name | P 1 |
Unit cell lengths | 62.922, 86.971, 105.190 |
Unit cell angles | 66.31, 73.22, 89.12 |
Refinement procedure
Resolution | 25.670 - 2.600 |
R-factor | 0.2077 |
Rwork | 0.205 |
R-free | 0.25600 |
Structure solution method | MOLECULAR REPLACEMENT |
RMSD bond length | 0.003 |
RMSD bond angle | 0.588 |
Data reduction software | XDS |
Data scaling software | Aimless |
Phasing software | PHASER |
Refinement software | PHENIX (1.20.1_4487) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 49.560 | 2.670 |
High resolution limit [Å] | 2.600 | 2.600 |
Rmerge | 0.092 | 0.604 |
Rmeas | 0.112 | 0.731 |
Rpim | 0.062 | 0.408 |
Total number of observations | 180312 | 13918 |
Number of reflections | 58184 | 4516 |
<I/σ(I)> | 8.1 | 1.8 |
Completeness [%] | 97.4 | |
Redundancy | 3.1 | 3.1 |
CC(1/2) | 0.995 | 0.765 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 7.5 | 291 | Morpheus H3: 20%(v/v) Glycerol, 10% w/v PEG 4000, 100 mM Imidazole/MES, pH 6.5, 20 mM DL-Glutamic acid, 20 mM DL-Alanine; 20 mM Glycine, 20 mM DL-Lysine monohydrochloride and 20 mM DL-Serine, CrneC.00629.a.FS11.PD00460 at 10 mg/mL. SCRI MorphH3 / HGN1192, Puck: CPS5110 position 14, Cryo: Direct |