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8G0Q

Crystal structure of the yeast Ndc80:Nuf2 head region with a bound Dam1 segment

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsAPS BEAMLINE 24-ID-E
Synchrotron siteAPS
Beamline24-ID-E
Temperature [K]100
Detector technologyPIXEL
Collection date2022-04-26
DetectorDECTRIS EIGER X 16M
Wavelength(s)0.97918
Spacegroup nameP 32 1 2
Unit cell lengths129.997, 129.997, 216.308
Unit cell angles90.00, 90.00, 120.00
Refinement procedure
Resolution99.860 - 3.220
R-factor0.264
Rwork0.263
R-free0.28470
Structure solution methodMOLECULAR REPLACEMENT
RMSD bond length0.003
RMSD bond angle0.562
Data reduction softwarexia2
Data scaling softwareSTARANISO
Phasing softwarePHASER
Refinement softwarePHENIX (1.20.1_4487)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]99.9003.540
High resolution limit [Å]3.2203.220
Rmerge0.1713.440
Rmeas0.1623.550
Rpim0.0210.418
Number of reflections249381549
<I/σ(I)>16.2
Completeness [%]93.675.8
Redundancy70.6
CC(1/2)0.9900.510
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP29312% (v/v) 2-methyl-2,4-pentanediol (MPD), 0.1 M ADA buffer pH 6.8

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PDB entries from 2024-06-26

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