8G0Q
Crystal structure of the yeast Ndc80:Nuf2 head region with a bound Dam1 segment
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 24-ID-E |
Synchrotron site | APS |
Beamline | 24-ID-E |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2022-04-26 |
Detector | DECTRIS EIGER X 16M |
Wavelength(s) | 0.97918 |
Spacegroup name | P 32 1 2 |
Unit cell lengths | 129.997, 129.997, 216.308 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 99.860 - 3.220 |
R-factor | 0.264 |
Rwork | 0.263 |
R-free | 0.28470 |
Structure solution method | MOLECULAR REPLACEMENT |
RMSD bond length | 0.003 |
RMSD bond angle | 0.562 |
Data reduction software | xia2 |
Data scaling software | STARANISO |
Phasing software | PHASER |
Refinement software | PHENIX (1.20.1_4487) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 99.900 | 3.540 |
High resolution limit [Å] | 3.220 | 3.220 |
Rmerge | 0.171 | 3.440 |
Rmeas | 0.162 | 3.550 |
Rpim | 0.021 | 0.418 |
Number of reflections | 24938 | 1549 |
<I/σ(I)> | 16.2 | |
Completeness [%] | 93.6 | 75.8 |
Redundancy | 70.6 | |
CC(1/2) | 0.990 | 0.510 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 293 | 12% (v/v) 2-methyl-2,4-pentanediol (MPD), 0.1 M ADA buffer pH 6.8 |