Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

8FZA

Class I type III preQ1 riboswitch from E. coli

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsSSRL BEAMLINE BL12-2
Synchrotron siteSSRL
BeamlineBL12-2
Temperature [K]100
Detector technologyPIXEL
Collection date2022-03-04
DetectorDECTRIS PILATUS 6M
Wavelength(s)1.8500
Spacegroup nameP 1 2 1
Unit cell lengths46.739, 32.272, 51.206
Unit cell angles90.00, 96.93, 90.00
Refinement procedure
Resolution36.530 - 2.300
R-factor0.2099
Rwork0.205
R-free0.25220
Structure solution methodSAD
RMSD bond length0.002
RMSD bond angle0.465
Data reduction softwareXDS (version 10-Jan-2022)
Data scaling softwareAimless (0.7.7)
Phasing softwarePHENIX (1.19.2_4158)
Refinement softwarePHENIX (1.20.1_4487)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]36.5302.380
High resolution limit [Å]2.3002.300
Rpim0.0240.271
Number of reflections128051388
<I/σ(I)>16.72.8
Completeness [%]98.197.9
Redundancy2216.3
CC(1/2)0.9990.917
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP629331% MPD, 0.05 M Na-cacodylate pH 6.0, 0.012 spermine-HCl, 0.1 M KCl and 0.002 M MgCl2, 0.005 M MnCl2-tetrahydrate

226707

PDB entries from 2024-10-30

PDB statisticsPDBj update infoContact PDBjnumon