8FRD
Mouse acidic mammalian chitinase, catalytic domain in complex with N,N'-diacetylchitobiose at pH 5.25
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | ALS BEAMLINE 8.3.1 |
Synchrotron site | ALS |
Beamline | 8.3.1 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2021-06-15 |
Detector | DECTRIS PILATUS3 6M |
Wavelength(s) | 1.11578 |
Spacegroup name | P 2 21 21 |
Unit cell lengths | 70.755, 92.451, 104.990 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 58.670 - 1.680 |
R-factor | 0.1405 |
Rwork | 0.139 |
R-free | 0.16780 |
Structure solution method | MOLECULAR REPLACEMENT |
RMSD bond length | 0.007 |
RMSD bond angle | 0.910 |
Data reduction software | xia2 (0.3.8.0) |
Data scaling software | DIALS (2.2.10-g6dafd9427-release) |
Phasing software | PHASER (2.8.3) |
Refinement software | PHENIX (1.20.1_4487) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 58.670 | 1.740 |
High resolution limit [Å] | 1.680 | 1.680 |
Rmerge | 0.116 | 0.569 |
Rmeas | 0.126 | 0.620 |
Rpim | 0.050 | 0.242 |
Number of reflections | 78163 | 7593 |
<I/σ(I)> | 9.68 | 3.09 |
Completeness [%] | 98.7 | 97.03 |
Redundancy | 6.4 | 6.4 |
CC(1/2) | 0.993 | 0.680 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 5.25 | 293.15 | 11 mg/mL AMCase catalytic domain 20% w/v PEG 6000 0.1 M Sodium Acetate pH 5.25 0.2 M Magnesium Chloride 29.00 mM GlcNAc2 |