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8FFB

Crystal structure of iron bound Dps protein (PA0962) from Pseudomonas aeruginosa (orthorhombic form)

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsNSLS-II BEAMLINE 19-ID
Synchrotron siteNSLS-II
Beamline19-ID
Temperature [K]291
Detector technologyPIXEL
Collection date2020-12-15
DetectorDECTRIS EIGER2 XE 9M
Wavelength(s)0.9795
Spacegroup nameP 21 21 21
Unit cell lengths131.081, 131.837, 157.817
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution48.860 - 2.250
R-factor0.1856
Rwork0.183
R-free0.23300
Structure solution methodMOLECULAR REPLACEMENT
RMSD bond length0.009
RMSD bond angle0.917
Data reduction softwareXDS
Data scaling softwareAimless
Phasing softwarePHASER
Refinement softwarePHENIX (dev_4126)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]48.8602.290
High resolution limit [Å]2.2502.250
Rmerge0.1281.245
Rmeas0.1391.353
Rpim0.0530.526
Total number of observations86655341723
Number of reflections1299436378
<I/σ(I)>11.21.6
Completeness [%]100.0
Redundancy6.76.5
CC(1/2)0.9970.625
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP72911 M (NH4)2SO4, 1M KCl, 100 mM HEPES. Soaking: crystals were transferred to a solution containing 80% crystallant, 20% glycerol and 50 mM FeCl2 and soaked for 10 minutes. Samples were harvested directly from the soaking solution.

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PDB entries from 2024-05-15

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