8FDV
LSD1-CoREST in complex N-formyl FAD and SNAG peptide
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | ESRF BEAMLINE ID30B |
Synchrotron site | ESRF |
Beamline | ID30B |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2021-02-22 |
Detector | DECTRIS EIGER2 X 9M |
Wavelength(s) | 0.96546 |
Spacegroup name | I 2 2 2 |
Unit cell lengths | 119.298, 180.388, 232.884 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 48.920 - 2.950 |
R-factor | 0.2176 |
Rwork | 0.216 |
R-free | 0.25200 |
Structure solution method | MOLECULAR REPLACEMENT |
RMSD bond length | 0.013 |
RMSD bond angle | 1.549 |
Data reduction software | XDS |
Data scaling software | Aimless |
Phasing software | PHASER |
Refinement software | PHENIX (1.18.2) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 48.920 | 3.040 |
High resolution limit [Å] | 2.950 | 2.950 |
Rmerge | 0.109 | 1.619 |
Rmeas | 0.124 | 1.865 |
Rpim | 0.058 | 0.905 |
Total number of observations | 222491 | 18249 |
Number of reflections | 52843 | 4534 |
<I/σ(I)> | 8.2 | 0.8 |
Completeness [%] | 99.5 | |
Redundancy | 4.2 | 4 |
CC(1/2) | 0.996 | 0.332 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 6.5 | 293 | 1.2 Na/K Tartrate, 100 mM ADA pH 6.5 |