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8FDQ

An AT-specific DNA 5-CGCAAATTTCGC-3' with benzimidazole (DB1476) complex

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsNSLS-II BEAMLINE 17-ID-1
Synchrotron siteNSLS-II
Beamline17-ID-1
Temperature [K]100
Detector technologyPIXEL
Collection date2022-06-07
DetectorDECTRIS EIGER X 9M
Wavelength(s)1
Spacegroup nameP 21 21 21
Unit cell lengths24.380, 38.980, 60.800
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution23.970 - 1.540
R-factor0.2082
Rwork0.204
R-free0.24220
Structure solution methodMOLECULAR REPLACEMENT
Data reduction softwareXDS
Data scaling softwareXDS
Phasing softwarePHASER
Refinement softwarePHENIX (1.19.2_4158)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]23.9701.595
High resolution limit [Å]1.5401.540
Rmerge0.017
Number of reflections8995879
<I/σ(I)>14.06
Completeness [%]99.3
Redundancy2
CC(1/2)0.9990.931
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP298MPD, SODIUM CACODYLATE TRIHYDRATE, SPERMINE TETRACHLORIDE, SODIUM CHLORIDE, MAGNESIUM HEXAHYDRATE

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PDB entries from 2024-08-07

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