8FBA
Crystal structure of Ky315 Fab in complex with circumsporozoite protein DND peptide
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | NSLS-II BEAMLINE 17-ID-1 |
Synchrotron site | NSLS-II |
Beamline | 17-ID-1 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2020-09-01 |
Detector | DECTRIS EIGER X 9M |
Wavelength(s) | 0.920088 |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 67.348, 65.245, 128.690 |
Unit cell angles | 90.00, 97.25, 90.00 |
Refinement procedure
Resolution | 39.370 - 1.960 |
R-factor | 0.1788 |
Rwork | 0.178 |
R-free | 0.22000 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | PDB ID 6ULF |
RMSD bond length | 0.005 |
RMSD bond angle | 0.758 |
Data reduction software | XDS |
Data scaling software | XSCALE |
Phasing software | PHASER |
Refinement software | PHENIX (1.20.1_4487) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 40.000 | 1.990 |
High resolution limit [Å] | 1.960 | 1.960 |
Number of reflections | 79772 | 3529 |
<I/σ(I)> | 9.6 | |
Completeness [%] | 100.0 | |
Redundancy | 7 | |
CC(1/2) | 0.996 | 0.531 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 293.15 | 0.2 M magnesium formate pH 5.9, 20% PEG3350 |