8F5D
Architecture of the MurE-MurF ligase bacterial cell wall biosynthesis complex
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | LNLS SIRIUS BEAMLINE MANACA |
Synchrotron site | LNLS SIRIUS |
Beamline | MANACA |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2021-12-04 |
Detector | DECTRIS PILATUS 2M |
Wavelength(s) | 0.978 |
Spacegroup name | I 2 2 2 |
Unit cell lengths | 105.636, 111.106, 219.151 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 49.550 - 2.560 |
R-factor | 0.253 |
Rwork | 0.249 |
R-free | 0.29240 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | Model from Alphafold |
RMSD bond length | 0.004 |
RMSD bond angle | 0.840 |
Data reduction software | XDS |
Data scaling software | STARANISO |
Phasing software | PHASER |
Refinement software | PHENIX (1.19.2_4158) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 49.550 | 2.880 |
High resolution limit [Å] | 2.560 | 2.564 |
Rmerge | 0.098 | 1.295 |
Rmeas | 0.102 | |
Rpim | 0.028 | 0.374 |
Number of reflections | 19997 | 1000 |
<I/σ(I)> | 18.6 | 2.2 |
Completeness [%] | 92.2 | 77.8 |
Redundancy | 13 | 12.8 |
CC(1/2) | 0.999 | 0.827 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 293 | 1.3 M ammonium sulfate, 20 % glycerol, 5 % PEG3350 |