Loading
PDBj
MenuPDBj@FacebookPDBj@X(formerly Twitter)PDBj@BlueSkyPDBj@YouTubewwPDB FoundationwwPDBDonate
RCSB PDBPDBeBMRBAdv. SearchSearch help

8F4D

RT XFEL structure of Photosystem II 50 microseconds after the third illumination at 2.15 Angstrom resolution

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeFREE ELECTRON LASER
Source detailsSLAC LCLS BEAMLINE MFX
Synchrotron siteSLAC LCLS
BeamlineMFX
Temperature [K]298
Detector technologyCCD
Collection date2018-11-27
DetectorRAYONIX MX340-HS
Wavelength(s)1.302
Spacegroup nameP 21 21 21
Unit cell lengths117.103, 222.196, 308.415
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution33.740 - 2.150
R-factor0.1888
Rwork0.188
R-free0.24330
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)7rf1
RMSD bond length0.010
RMSD bond angle1.184
Data reduction softwarecctbx.xfel
Data scaling softwarecctbx.xfel.merge
Phasing softwarePHASER
Refinement softwarePHENIX (1.19.2_4158)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]33.7402.190
High resolution limit [Å]2.1502.150
Number of reflections43111321309
<I/σ(I)>3.730.46
Completeness [%]100.0
Redundancy7410.5
CC(1/2)0.9900.050
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1BATCH MODE6.52980.1 M MES pH 6.5, 0.1 M NH4Cl, 35% (w/v) PEG 5000

237423

PDB entries from 2025-06-11

PDB statisticsPDBj update infoContact PDBjnumon