8F0W
Tudor Domain of Tumor suppressor p53BP1 with MFP-5956
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | ROTATING ANODE |
Source details | RIGAKU FR-E SUPERBRIGHT |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2018-02-26 |
Detector | RIGAKU SATURN A200 |
Wavelength(s) | 1.54 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 48.479, 77.027, 87.208 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 50.010 - 1.520 |
R-factor | 0.2122 |
Rwork | 0.212 |
R-free | 0.23440 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 2g3r |
RMSD bond length | 0.010 |
RMSD bond angle | 1.429 |
Data reduction software | HKL-3000 |
Data scaling software | HKL-3000 |
Phasing software | PHASER (2.8.2) |
Refinement software | REFMAC (5.8.0189) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 50.010 | 50.000 | 1.550 |
High resolution limit [Å] | 1.520 | 4.130 | 1.520 |
Rmerge | 0.036 | 0.027 | 0.444 |
Rmeas | 0.039 | 0.029 | 0.489 |
Rpim | 0.014 | 0.010 | 0.198 |
Number of reflections | 48449 | 2720 | 1974 |
<I/σ(I)> | 15.7 | ||
Completeness [%] | 94.7 | 97.7 | 79.1 |
Redundancy | 7.5 | 7.1 | 5.5 |
CC(1/2) | 0.999 | 0.831 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 7.5 | 291 | 2M ammonium sulfate, 0.1 M HEPES pH 7.5, 2% PEG 400 |