8EXZ
Structure of GDAP1 containing CMT mutant T157P
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 31-ID |
Synchrotron site | APS |
Beamline | 31-ID |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2022-04-18 |
Detector | DECTRIS PILATUS 6M |
Wavelength(s) | 0.9793 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 73.586, 80.064, 85.810 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 55.860 - 2.820 |
R-factor | 0.2572 |
Rwork | 0.255 |
R-free | 0.27920 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 6iuh |
Data reduction software | autoPROC |
Data scaling software | autoPROC |
Phasing software | PHASER |
Refinement software | PHENIX (1.20.1_4487) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 58.540 | 2.869 |
High resolution limit [Å] | 2.820 | 2.820 |
Rmerge | 0.126 | 0.708 |
Rpim | 0.352 | |
Number of reflections | 12544 | 618 |
<I/σ(I)> | 9 | 2.2 |
Completeness [%] | 98.1 | 98.6 |
Redundancy | 4.9 | 4.6 |
CC(1/2) | 0.998 | 0.866 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 5.5 | 298 | 0.2M Ammonium Sulfate, 0.1M Bis-Tris, 25% w/v PEG 3350 |