8ESG
Bile Salt Hydrolase B from Lactobacillus gasseri with covalent inhibitor bound
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 23-ID-D |
Synchrotron site | APS |
Beamline | 23-ID-D |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2021-08-01 |
Detector | DECTRIS PILATUS3 6M |
Wavelength(s) | 1.03 |
Spacegroup name | P 61 2 2 |
Unit cell lengths | 157.362, 157.362, 140.718 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 48.950 - 2.180 |
R-factor | 0.2366 |
Rwork | 0.236 |
R-free | 0.25510 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 7svh |
RMSD bond length | 0.002 |
RMSD bond angle | 0.466 |
Data reduction software | XDS |
Data scaling software | XDS |
Phasing software | PHASER |
Refinement software | PHENIX (1.20_4459) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 48.950 | 2.258 |
High resolution limit [Å] | 2.180 | 2.180 |
Rmerge | 0.125 | 6.367 |
Rmeas | 0.128 | 6.518 |
Rpim | 0.028 | 1.380 |
Number of reflections | 100941 | 5296 |
<I/σ(I)> | 16.7 | 0.57 |
Completeness [%] | 99.8 | 98.6 |
Redundancy | 20.8 | 21.7 |
CC(1/2) | 1.000 | 0.209 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 293 | 0.2 M Lithium Sulfate, 0.1 M CAPS:NaOH, pH 10.5, 2M Ammonium Sulfate. Crystals formed in a 2:1 ratio of protein:mother liquor. 2.5 uM protein was incubated with 50 uM inhibitor for 1h at 37oC. Mixture was washed 3x with buffer in a spin concentrator and then concentrated to 8 mg/mL final concentration. |