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8ERH

HTLV-1 capsid protein C-terminal domain

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsAUSTRALIAN SYNCHROTRON BEAMLINE MX2
Synchrotron siteAustralian Synchrotron
BeamlineMX2
Temperature [K]100
Detector technologyPIXEL
Collection date2022-04-08
DetectorDECTRIS EIGER2 S 16M
Wavelength(s)0.9537
Spacegroup nameP 21 21 21
Unit cell lengths56.982, 94.121, 96.020
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution36.720 - 1.470
R-factor0.1691
Rwork0.168
R-free0.19250
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)Alphafold2 prediction
Data reduction softwareXDS
Data scaling softwareAimless (0.7.4)
Phasing softwarePHASER (2.8.3)
Refinement softwarePHENIX (1.20.1)
Data quality characteristics
 OverallInner shellOuter shell
Low resolution limit [Å]49.00049.0001.490
High resolution limit [Å]1.4708.0401.470
Rmerge0.0720.0371.332
Rmeas0.0750.0381.390
Rpim0.0210.0110.386
Total number of observations1179696705248334
Number of reflections885266313990
<I/σ(I)>15.4451.4
Completeness [%]99.698.992.1
Redundancy13.311.212.1
CC(1/2)0.9990.9990.688
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP4.22931.5 M (NH4)2SO4, 0.1 M Na2HPO4, pH 4.2

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PDB entries from 2024-08-07

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