8EQO
Crystal structure of E.coli DsbA mutant K58A
Experimental procedure
実験手法 | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | AUSTRALIAN SYNCHROTRON BEAMLINE MX2 |
Synchrotron site | Australian Synchrotron |
Beamline | MX2 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2020-03-10 |
Detector | DECTRIS EIGER X 16M |
Wavelength(s) | 0.95370 |
Spacegroup name | C 1 2 1 |
格子定数 [Å] | 117.635, 63.090, 74.408 |
格子定数 [度] | 90.00, 126.65, 90.00 |
精密化法
分解能 | 34.180 - 1.620 |
R因子 | 0.1563 |
Rwork | 0.155 |
R-free | 0.18380 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 1fvk |
Data reduction software | MOSFLM |
Data scaling software | Aimless (0.7.4) |
Phasing software | PHASER |
Refinement software | PHENIX (1.19.2_4158) |
Quality characteristics
Overall | Inner shell | Outer shell | |
分解能 [Å] (低) | 48.100 | 48.100 | 1.650 |
分解能 [Å] (高) | 1.620 | 8.890 | 1.620 |
Rmerge_l_obs | 0.033 | 0.020 | 0.242 |
Rmeas | 0.038 | 0.023 | 0.281 |
Rpim | 0.019 | 0.012 | 0.141 |
Total number of observations | 203208 | 1193 | 8835 |
独立反射数 | 54574 | 345 | 2392 |
<I/σ(I)> | 19.7 | 44 | 4.1 |
完全性 [%] | 98.8 | 94.7 | 88 |
冗長性 | 3.7 | 3.5 | 3.7 |
CC(1/2) | 0.999 | 0.999 | 0.928 |
結晶化条件
結晶ID | 方法 | pH | 温度 | 溶液条件 |
1 | VAPOR DIFFUSION, HANGING DROP | 293 | 11-13% PEG 8000, 5-7.5% glycerol, 1 mM copper(II) chloride, 100 mM sodium cacodylate |