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8EPD

Engineering Crystals with Tunable Symmetries from 14- or 16-Base-Long DNA Strands

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeROTATING ANODE
Source detailsRIGAKU RUH2R
Temperature [K]100
Detector technologyIMAGE PLATE
Collection date2022-03-02
DetectorRIGAKU RAXIS IV++
Wavelength(s)1.54
Spacegroup nameP 43 2 2
Unit cell lengths34.166, 34.166, 104.316
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution17.810 - 2.420
R-factor0.2488
Rwork0.246
R-free0.29810
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)ideal B type DNA duplexes generated in Cadnano
RMSD bond length0.011
RMSD bond angle1.336
Data reduction softwareautoPROC
Data scaling softwareSTARANISO
Phasing softwarePHASER
Refinement softwarePHENIX (1.20.1_4487)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]17.8102.924
High resolution limit [Å]2.4202.421
Number of reflections1864189
<I/σ(I)>19.4
Completeness [%]87.5
Redundancy11.48.1
CC(1/2)1.0000.670
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP2950.5 ug/uL motif 0.005 M magnesium sulfate hydrate, 0.005 M HEPES sodium pH 7.0, 0.16 M lithium sulfate monohydrate, 4 % MPD at pH 7.0

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