8EOL
CRYSTAL STRUCTURE OF NAGB-II PHOSPHOSUGAR ISOMERASE FROM SHEWANELLA DENITRIFICANS OS217 AT 2.17 A RESOLUTION
Experimental procedure
| Experimental method | SINGLE WAVELENGTH |
| Source type | ROTATING ANODE |
| Source details | RIGAKU MICROMAX-007 HF |
| Temperature [K] | 100 |
| Detector technology | PIXEL |
| Collection date | 2018-09-18 |
| Detector | DECTRIS PILATUS 200K |
| Wavelength(s) | 1.5419 |
| Spacegroup name | P 21 21 21 |
| Unit cell lengths | 72.378, 78.746, 96.856 |
| Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
| Resolution | 41.251 - 2.170 |
| R-factor | 0.1904 |
| Rwork | 0.188 |
| R-free | 0.23070 |
| Structure solution method | MOLECULAR REPLACEMENT |
| Starting model (for MR) | Structure with ligands GNPDA-GlcNol6P |
| RMSD bond length | 0.010 |
| RMSD bond angle | 1.025 |
| Data reduction software | HKL-3000 |
| Data scaling software | HKL-3000 |
| Phasing software | PHASER |
| Refinement software | PHENIX ((1.11.1_2575: ???)) |
Data quality characteristics
| Overall | Outer shell | |
| Low resolution limit [Å] | 41.259 | 2.240 |
| High resolution limit [Å] | 2.170 | 2.170 |
| Number of reflections | 29534 | 2539 |
| <I/σ(I)> | 2.8 | |
| Completeness [%] | 98.5 | |
| Redundancy | 11 | |
| CC(1/2) | 0.931 | 0.931 |
Crystallization Conditions
| crystal ID | method | pH | temperature | details |
| 1 | VAPOR DIFFUSION, SITTING DROP | 8.5 | 291 | 0.2 M MgCl2, 0.1 M Tris, pH 8.5, 30% w/v PEG 4000. Crystals grew in the presence of 1mM GlcNAc6P; however, no density for the ligand was observed in the electron density maps. |






