8EO4
Human PU.1 ETS-Domain (165-270) Bound to d(AATAAGCGGAAGTGGG) with Di-methylated CpG sites
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 22-ID |
Synchrotron site | APS |
Beamline | 22-ID |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2021-03-16 |
Detector | DECTRIS EIGER X 16M |
Wavelength(s) | 1.0000000 |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 42.905, 60.675, 44.538 |
Unit cell angles | 90.00, 116.81, 90.00 |
Refinement procedure
Resolution | 33.250 - 1.240 |
R-factor | 0.1384 |
Rwork | 0.137 |
R-free | 0.16510 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 8e3k |
RMSD bond length | 0.010 |
RMSD bond angle | 1.279 |
Data reduction software | XDS |
Data scaling software | Aimless |
Phasing software | PHASER |
Refinement software | PHENIX (1.19.2_4158) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 33.250 | 1.284 |
High resolution limit [Å] | 1.240 | 1.240 |
Rmerge | 0.042 | 0.356 |
Rmeas | 0.049 | 0.418 |
Rpim | 0.026 | 0.213 |
Number of reflections | 56794 | 5672 |
<I/σ(I)> | 17.99 | 3.67 |
Completeness [%] | 98.4 | 99.04 |
Redundancy | 3.7 | 3.6 |
CC(1/2) | 0.995 | 0.939 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 4.6 | 293 | 100 mM Sodium Acetate, pH=4.6, 2% PEG3350 |